Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836920.1_cds_XP_016506478.1_19699
CDS Infomation

[gene=LOC107824244] [db_xref=GeneID:107824244] [protein=nucleolin-like isoform X3] [protein_id=XP_016506478.1] [location=join(68323..68470,68957..69718,69776..70974,71051..71140,71300..71764,72116..72212,72307..72471,72789..73015,73121..73211,73298..73350,73430..73507)] [gbkey=CDS]
Sequence

ATGAGAACTCGAAGTGCCGAAAAGAAATCTGCCGGAAAACAGCAAATCGCTGCCGAGCCG
GCGGCTGAGCCAGCTGCCGCGACGAAGCGTACTCCGCCCTCTAGGGCTAGGCAAGTTAGG
GCCTCTGGATCCACTTTCCCATCACCGGCTGAAGAAGCAAAAGCTTCAGATGCAGATGGG
GCTGTTCAATCAACACCGGAAGCAAAACCTGCTTTAGGTAGGAAAACTACTCGAAGGGTT
GCGAGGAAGGTGGTAAAGAAAGTTCCGGCTTCTTCTAGAACTACTCCGGATAAGACACCT
AGATCAGAAGATGCTGGAATGGCAGTGCCTGAAGATACTGTCCAAGAGAAGGTTGCGGAG
GACTCAAAGGAAGATCCTGTCAAAGAGAAAGAAGCAGCAGAATCAAAGAAATGTGTCAAG
AAGGGAGATGCAGAAGACTCGAAGGAAGATCATGTGAAGGTTGAAGATGCACAGGAATCA
AAGAAATCTATCAAGGAGGAAGAGACGGAGAACTCAAAGGAAGTTCATGACAAGGAGGAA
GATGCAGAGGACTCAAAGGAAGATCCTGTCAAGGAGGAAGGTCTACAGGACCTAAAGGAA
GATGCTGCGAAGGAGAAAGATACAGAGGACTTGAAGGAAGATATTGTCAAGGATGAAGAT
GCTGAGGTCTCAAAGGAAGATCCTGTCAAGGAGAAAGGTCTACAGGACCTAAAGGAAGAT
GCTACAATGGAGAAAGATGCACAGGACTTAAAGGAAGATATTGTCAAGGAGGAAGATATA
GTGGAGTCAAAAGAAGAGGCTATAAAGGAGAAAAATGTAGAGGAGTCAAAGGAAGATGTT
GTAATGGGGGAAGATGCAGAGTCAGAGGAATATCCCGCAAAGGAGGAAGATGCAGAGGGT
TCAAAGGAAGATGCTGTGATGGAGAAAAATGTAGAGGAGTCGAAGGAAGATCTTGTCAAG
GAGGAAGATGCTGTGATGGAGAAAGATGCAGAGGAGTCGAAGGAAGATCTTGTCAAGGAG
GAAGATGCAGAGTACTCAAAGGAATATCCTGAGAAGGAGGACGATGCAGAGGGTTCAAAG
GAAGATGCCATGAAAGAGAAAGATGCAGAGGACTTAAAGGAAAGTCCTGTCATGGAGGAA
GATGAAGAGGACTCAAAGGAAGATCCTGTCAAGGAGGAAGATGCAGAGGAGTCAAAGGAA
GGTCCTGTTAAGGAGAAAGATGCAGAGGACTTAAATGATGCAGGACCAACGCTCATGTAT
GAGATGGATCCTGAGGAAATGGAAGAATCTTCATATAATTTAGTGGGCACAGTTCAAGAT
GCTGGTGATTCTGTGATGGAAGATCAAAATGGAAACAAGGAGGAACAGACAGGTGATATA
CAGGAGGAACCAGCTAAAAATACTTTAATGTCTCTAGATGAAGTAAATGTTGGCAGTGAT
ATGAGATCGTTAGAGGAAATTTGCCACGATGTGGGAACTTCAGAAAATCAGGGATCTACT
ACTACATATGTCCAATCTCAAGATCTGATTATTGGCGATATGAAATCTTCAGATAAGCAG
GAACATGTTTCTACAGAACTGAAAATTCAGGAGGGTGAAGGATCTAATAAAGCAAAAGAA
GGATCGGAGTTGATGGGAGGAAAGGACAATAATTCAACTCCTACTGGCGATAATATAAAT
GCAAACTGTGCAGAAGATAGAATGGAGGAAGATACCGACAAGAAGATGAAGGGAAAGGAT
ATTTCTGTTGACGAAGCTGGTGAAGATAAAATAGAGGCTTTTGCTGATCAAGAGAATGGT
GAAGAGTTTGTGGAAGATGGTGTACCCGAGCATTGTGAGGAAGCTGAGACACTGGATGAT
GAGCGTGCTCAACTGGCTGCCCATGCAAAGGAACGAATGAAGAGGAAAGAGCTGGAAGTA
TTTGTTGGTGGGTTAGACCGTGATGCTGTGGAGGAGGATCTAAAAAGGGTGTTCCAGCAT
GTTGGAGAGGTAATTGATGTGCGAATGCACAGAGAGGTGTCAACGAACAAGAATAAGGGA
TACGCATTCGTGAAGTTTGCAACTAAGGAGCAAGCAAGCCGTGCTTTGTCTGAAATGAGA
AACCCAGTTATACGGGGAAAGCGATGTGGCACTGCTCCAAGTGAGGACAATGACACCTTA
TTCTTAGGAAATATTTGCAATACATGGACAAAGGAAGCCGTAAGGCAAAAGCTGAAAGAT
TATGGTGTAGAAGGTGTTCAAAGCATTAACCTGGTGGCCGATCCGAAACATGAAGGTTTG
AGTCGTGGTTTTGCATTTCTCGAGTTCCCTTGTCACACTGATGCCATGACAGCATACAAA
ATACTTCAAAGACCTGATGTTATTTTTGGTCACTCTGAGAGGACTGCCAAAGTAGCTTTT
GCTGAACCGTTACGTGATCCAGATCCAGAGGTAATGGCTCAAGTGAAGTCAGTATTTATC
GATGGACTCCCTCCTTATTGGGATGAAGATCGCGCCCGTGAGAAATTTAAATGTTTTGGG
GATATTTCAAGAATTACGCTAGCCAGGAATATGTCAACGGCAAAGCGGAAGGATTTTGGA
TTTGTTGATTTCAGCACACATGAAGCTGCTGTTGCTTGTGTTGCGGGCATAAATAACACA
GAGCTGGGTGATGGCAATTTGAAGGCAAAAGTGCGAGCAAGACTTTCAAATCCTCAACCA
AAAACTCAGGCTGTAAAAGGTGGATTGTCTGGAGGATTCCGAATTAGCCGTGGTTCCATG
GGAAGGGGCTTTCCCCGAGGAGGGCATACTTTTGGTAGAGCTAATTTTCCGCGCGGTAGG
GGCTTTCACCCGCGTGTACCTGGTCATGGCGGTAGAATGGGCTTTGCTGAACATCAATTT
GGTAGCCCTTATCCTCCTATCCGTGGAAGGTCAAACTTTGGACGGGCAGGTGGGAGGTGG
AATTTCAGTGGTGCTCAGCCAGTATCTGTTGATGGTCCAATGTTTCTTGATAGAATGAGG
CACGGAGATAGAGGGCAGGCAGATGATGCCTTCTTTAGGAGACAACAATTTCCTGTTGAA
GGACTTAACAGGCCATTCATGGGTAGGCACTTTGAGGACCGTTACTATCATGATAACACT
GACCATGGGTTGAAGAGGCCCTTTCCTATGACAGACCCGGATCCGGATTACTCGGGGCCG
AGCAGACGTCCTCGGTTTGATCATTCAGAGTCTGCAAATTCTCTTCACAGGGATCGTTAT
AGAGATAATTTTCCTCCCGGTGGCGATCATTACACACGTGATTATTACGGCTCTGATTGT
GGGAGAGGCCCGTATCCATCTTTCAATGGAGGTGATCGTCCATTTGGGCGTGGTTATGGA
CGTGGTTATTATTAG

Peptide Sequence

PEP ID

XP_016506478.1
PEP Infomation

PREDICTED: nucleolin-like isoform X3 [Nicotiana tabacum]
Sequence

MRTRSAEKKSAGKQQIAAEPAAEPAAATKRTPPSRARQVRASGSTFPSPAEEAKASDADG
AVQSTPEAKPALGRKTTRRVARKVVKKVPASSRTTPDKTPRSEDAGMAVPEDTVQEKVAE
DSKEDPVKEKEAAESKKCVKKGDAEDSKEDHVKVEDAQESKKSIKEEETENSKEVHDKEE
DAEDSKEDPVKEEGLQDLKEDAAKEKDTEDLKEDIVKDEDAEVSKEDPVKEKGLQDLKED
ATMEKDAQDLKEDIVKEEDIVESKEEAIKEKNVEESKEDVVMGEDAESEEYPAKEEDAEG
SKEDAVMEKNVEESKEDLVKEEDAVMEKDAEESKEDLVKEEDAEYSKEYPEKEDDAEGSK
EDAMKEKDAEDLKESPVMEEDEEDSKEDPVKEEDAEESKEGPVKEKDAEDLNDAGPTLMY
EMDPEEMEESSYNLVGTVQDAGDSVMEDQNGNKEEQTGDIQEEPAKNTLMSLDEVNVGSD
MRSLEEICHDVGTSENQGSTTTYVQSQDLIIGDMKSSDKQEHVSTELKIQEGEGSNKAKE
GSELMGGKDNNSTPTGDNINANCAEDRMEEDTDKKMKGKDISVDEAGEDKIEAFADQENG
EEFVEDGVPEHCEEAETLDDERAQLAAHAKERMKRKELEVFVGGLDRDAVEEDLKRVFQH
VGEVIDVRMHREVSTNKNKGYAFVKFATKEQASRALSEMRNPVIRGKRCGTAPSEDNDTL
FLGNICNTWTKEAVRQKLKDYGVEGVQSINLVADPKHEGLSRGFAFLEFPCHTDAMTAYK
ILQRPDVIFGHSERTAKVAFAEPLRDPDPEVMAQVKSVFIDGLPPYWDEDRAREKFKCFG
DISRITLARNMSTAKRKDFGFVDFSTHEAAVACVAGINNTELGDGNLKAKVRARLSNPQP
KTQAVKGGLSGGFRISRGSMGRGFPRGGHTFGRANFPRGRGFHPRVPGHGGRMGFAEHQF
GSPYPPIRGRSNFGRAGGRWNFSGAQPVSVDGPMFLDRMRHGDRGQADDAFFRRQQFPVE
GLNRPFMGRHFEDRYYHDNTDHGLKRPFPMTDPDPDYSGPSRRPRFDHSESANSLHRDRY
RDNFPPGGDHYTRDYYGSDCGRGPYPSFNGGDRPFGRGYGRGYY

Transcript Sequence

Gene sequence data has not been registered.